STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95663.1Helix-turn-helix domain-containing protein; COG1396 Predicted transcriptional regulators. (631 aa)    
Predicted Functional Partners:
AEN95667.1
ABC transporter ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
    0.501
AEN95664.1
Hypothetical protein.
       0.499
AEN95665.1
Bacitracin ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
       0.487
AEN95666.1
Hypothetical protein.
       0.487
AEN97782.1
Hypothetical protein.
  
    0.446
AEN97091.1
Cell wall binding domain-containing protein; COG1387 Histidinol phosphatase and related hydrolases of the PHP family.
  
     0.440
AEN96751.1
Glucosyl hydrolase family protein.
  
     0.436
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.