Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AEN95674.1Cell wall hydrolase; COG3883 Uncharacterized protein conserved in bacteria. (384 aa)    
Predicted Functional Partners:
AEN96673.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.672
AEN95673.1
Response regulator; COG2206 HD-GYP domain.
 
     0.627
AEN97588.1
YbbR family protein; COG4856 Uncharacterized protein conserved in bacteria.
 
     0.624
AEN97347.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family.
  
    0.584
AEN98280.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
  
 0.578
AEN95257.1
COG1345 Flagellar capping protein.
  
     0.558
AEN95640.1
Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
  
     0.552
AEN95870.1
Stage V sporulation protein AD; COG0183 Acetyl-CoA acetyltransferase.
   
  
 0.550
gpr
Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.540
AEN95857.1
Stage V sporulation AC, SpoVAC.
  
  
 0.467
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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