Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95716.1Hypothetical protein. (99 aa)    
Predicted Functional Partners:
AEN98295.1
Hypothetical protein.
  
     0.680
AEN97659.1
Hypothetical protein.
  
     0.610
AEN96964.1
Hypothetical protein.
  
     0.583
AEN95919.1
Hypothetical protein.
  
     0.561
AEN96667.1
Hypothetical protein.
  
     0.538
AEN95694.1
Hypothetical protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
     0.505
AEN95705.1
Cyclic nucleotide-binding protein.
  
     0.478
AEN97590.1
Hypothetical protein.
  
     0.454
AEN96763.1
Hypothetical protein.
  
     0.440
AEN98059.1
Hypothetical protein; COG4823 Abortive infection bacteriophage resistance protein.
  
     0.418
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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