STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN95742.1Integral membrane sensor signal transduction histidine kinase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. (503 aa)    
Predicted Functional Partners:
AEN95743.1
COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
    0.924
AEN98379.1
COG3279 Response regulator of the LytR/AlgR family.
 
  
 0.789
AEN95744.1
TRAP dicarboxylate transporter, DctP subunit; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
       0.773
AEN95745.1
Cupin 2 conserved barrel domain protein; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
       0.741
AEN96391.1
Diguanylate cyclase/phosphodiesterase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
 
 0.690
AEN95739.1
Tripartite ATP-independent periplasmic transporter DctQ component; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.662
AEN95831.1
COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
    0.594
AEN95741.1
Hypothetical protein.
       0.554
AEN95379.1
PAS/PAC sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver.
 
 
 
 0.545
AEN95947.1
COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
    0.526
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.