STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95763.1COG3533 Uncharacterized protein conserved in bacteria. (646 aa)    
Predicted Functional Partners:
AEN95761.1
COG3534 Alpha-L-arabinofuranosidase.
 
   
 0.926
AEN97156.1
alpha-N-arabinofuranosidase; COG3534 Alpha-L-arabinofuranosidase.
 
   
 0.785
AEN95762.1
Hypothetical protein.
       0.773
AEN97241.1
alpha-L-rhamnosidase.
  
     0.644
AEN97308.1
COG1874 Beta-galactosidase.
 
    0.632
AEN95758.1
Extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.611
AEN95759.1
COG1175 ABC-type sugar transport systems, permease components.
 
     0.601
AEN95754.1
Alpha-N-arabinofuranosidase; COG3940 Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.598
AEN96322.1
Glycoside hydrolase clan GH-D.
 
     0.590
AEN95760.1
Binding-protein-dependent transporters inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
     0.579
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.