STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95797.1Hypothetical protein; COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain. (465 aa)    
Predicted Functional Partners:
AEN97592.1
Hypothetical protein.
 
     0.758
AEN96505.1
COG1317 Flagellar biosynthesis/type III secretory pathway protein.
 
     0.713
AEN96525.1
GTP-binding signal recognition particle SRP54, G-domain protein; COG1419 Flagellar GTP-binding protein.
 
   
 0.702
AEN96517.1
Flagellar motor switch protein; COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation.
 
    0.699
AEN96527.1
Hypothetical protein; COG5581 Predicted glycosyltransferase.
 
    0.682
AEN98446.1
COG1728 Uncharacterized protein conserved in bacteria.
  
     0.670
AEN96516.1
COG1868 Flagellar motor switch protein.
 
     0.666
AEN95253.1
Flagellar hook-associated protein 3; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
    0.655
fliW
Flagellar assembly factor fliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.
 
     0.650
AEN97658.1
Hypothetical protein.
  
     0.634
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.