STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95798.1Hypothetical protein. (53 aa)    
Predicted Functional Partners:
AEN95799.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.875
AEN96476.1
Hypothetical protein.
 
     0.725
AEN97659.1
Hypothetical protein.
  
     0.699
AEN96215.1
Hypothetical protein.
  
     0.689
AEN96953.1
Hypothetical protein.
  
     0.671
xseB
Exodeoxyribonuclease VII small subunit XseB; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
     0.665
AEN97749.1
Hypothetical protein.
  
     0.660
AEN96847.1
Hypothetical protein.
  
     0.656
AEN97591.1
Hypothetical protein.
  
     0.655
AEN97748.1
Hypothetical protein.
  
     0.646
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.