STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95833.1LacI family transcriptional regulator; COG1879 ABC-type sugar transport system, periplasmic component. (374 aa)    
Predicted Functional Partners:
AEN95835.1
Inner-membrane translocator; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 0.988
AEN95834.1
COG1129 ABC-type sugar transport system, ATPase component.
 
 0.987
AEN95836.1
Monosaccharide ABC transporter membrane protein, CUT2 family; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 0.987
AEN95838.1
LacI family transcriptional regulator; COG1879 ABC-type sugar transport system, periplasmic component.
 
  
 
0.936
AEN96036.1
Inner-membrane translocator; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 
 0.862
AEN95379.1
PAS/PAC sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver.
  
 
 0.813
AEN96120.1
COG0642 Signal transduction histidine kinase.
   
 
 0.813
AEN96035.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; COG1129 ABC-type sugar transport system, ATPase component.
 
 
 0.810
AEN95899.1
COG1129 ABC-type sugar transport system, ATPase component.
 
 
 0.807
AEN95374.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
   
 
 0.782
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.