Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95855.1Stage V sporulation protein AB. (142 aa)    
Predicted Functional Partners:
AEN95854.1
Stage V sporulation protein AA.
 
    0.965
AEN95857.1
Stage V sporulation AC, SpoVAC.
 
  
 0.863
AEN95870.1
Stage V sporulation protein AD; COG0183 Acetyl-CoA acetyltransferase.
 
  
 0.790
AEN95853.1
Hypothetical protein.
       0.773
AEN95871.1
Stage V sporulation protein AE; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  
 0.713
AEN96928.1
Sporulation stage III, protein AE.
  
     0.659
AEN95856.1
Hypothetical protein.
       0.645
AEN95800.1
COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
 
     0.578
AEN96592.1
Peptidase M23; COG0739 Membrane proteins related to metalloendopeptidases.
  
    0.563
AEN95596.1
COG2208 Serine phosphatase RsbU, regulator of sigma subunit.
  
     0.556
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.