STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95888.1Peptidase S8/S53 subtilisin kexin sedolisin; COG1404 Subtilisin-like serine proteases. (568 aa)    
Predicted Functional Partners:
AEN95909.1
COG3409 Putative peptidoglycan-binding domain-containing protein.
 
  
 0.800
AEN97730.1
COG1388 FOG: LysM repeat.
  
  
 0.749
AEN96009.1
COG3976 Uncharacterized protein conserved in bacteria.
  
     0.745
AEN96249.1
Stage II sporulation protein P.
  
     0.736
AEN96925.1
Hypothetical protein.
  
     0.735
AEN97457.1
Hypothetical protein.
  
     0.731
AEN95698.1
Hypothetical protein.
  
     0.730
AEN95585.1
Spore coat protein CotS related protein; COG2334 Putative homoserine kinase type II (protein kinase fold).
  
     0.709
AEN98327.1
Hypothetical protein; COG0789 Predicted transcriptional regulators.
  
     0.704
AEN97968.1
Hypothetical protein; COG1388 FOG: LysM repeat.
  
  
 0.702
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.