Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN95889.1COG4826 Serine protease inhibitor; Belongs to the serpin family. (450 aa)    
Predicted Functional Partners:
AEN95890.1
RNA polymerase sigma-70 factor, ECF subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.786
AEN95709.1
Cell surface protein; COG4870 Cysteine protease.
  
 
 0.701
AEN95891.1
Hypothetical protein.
       0.669
AEN95888.1
Peptidase S8/S53 subtilisin kexin sedolisin; COG1404 Subtilisin-like serine proteases.
   
 
 0.561
AEN96989.1
gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I, metallo peptidase, MEROPS family M14C; COG3409 Putative peptidoglycan-binding domain-containing protein.
  
  
 0.501
AEN95892.1
Hypothetical protein.
       0.485
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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