Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN95950.1ABC transporter inner membrane protein; COG1175 ABC-type sugar transport systems, permease components. (353 aa)    
Predicted Functional Partners:
AEN95951.1
ABC transporter membrane spanning protein (sugar); COG0395 ABC-type sugar transport system, permease component.
 
   0.961
AEN95169.1
COG0395 ABC-type sugar transport system, permease component.
 
 
 0.881
AEN97049.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.877
AEN96963.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.875
AEN97257.1
ABC transporter transmembrane protein; COG3833 ABC-type maltose transport systems, permease component.
 
 
 0.872
AEN97413.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
   0.868
AEN97157.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
   0.866
AEN95760.1
Binding-protein-dependent transporters inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
   0.865
AEN96612.1
COG0395 ABC-type sugar transport system, permease component.
 
   0.864
AEN96749.1
Binding-protein-dependent transporters inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
   0.864
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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