STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95956.1Hypothetical protein. (265 aa)    
Predicted Functional Partners:
AEN95952.1
Putative glucoronyl hydrolase.
 
     0.919
AEN95953.1
Heparinase II/III family protein.
 
     0.861
AEN95955.1
Hypothetical protein.
 
     0.843
AEN95954.1
Hypothetical protein.
       0.773
AEN95949.1
Extracellular solute-binding protein family 1; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.768
AEN95947.1
COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
     0.661
AEN95946.1
Hypothetical protein.
  
     0.624
AEN97415.1
Family 1 extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
  
     0.543
AEN95937.1
Gluconate 5-dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
     0.505
kduI
5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
     0.503
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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