STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95988.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
AEN95987.1
Trk system potassium uptake protein TrkH; COG0168 Trk-type K+ transport systems, membrane components.
       0.556
AEN95986.1
Trk system potassium uptake protein TrkA; COG0569 K+ transport systems, NAD-binding component.
       0.542
AEN95985.1
Hypothetical protein.
       0.488
AEN95983.1
Two-component system, OmpR family, KDP operon response regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.442
AEN95984.1
Two-component system, OmpR family, sensor histidine kinase; COG2205 Osmosensitive K+ channel histidine kinase.
       0.442
AEN95989.1
COG1329 Transcriptional regulators, similar to M. xanthus CarD.
       0.430
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.