Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN95993.1Hypothetical protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (243 aa)    
Predicted Functional Partners:
AEN95992.1
Hypothetical protein; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
       0.773
tdk
COG1435 Thymidine kinase.
       0.748
AEN98247.1
Membrane protease subunit, stomatin/prohibitin-like protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
    0.487
AEN96820.1
Putative PHP domain-containing protein; COG0613 Predicted metal-dependent phosphoesterases (PHP family).
  
     0.450
AEN95990.1
Hypothetical protein.
       0.446
AEN97661.1
Hypothetical protein.
  
     0.433
AEN98425.1
COG3973 Superfamily I DNA and RNA helicases.
  
     0.423
AEN96858.1
Transporter; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.420
AEN97575.1
Hypothetical protein; COG0489 ATPases involved in chromosome partitioning.
  
     0.418
AEN97783.1
Hypothetical protein.
  
     0.409
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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