Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95996.1Hypothetical protein; COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases. (105 aa)    
Predicted Functional Partners:
AEN95997.1
Hypothetical protein.
       0.741
AEN95428.1
COG3943 Virulence protein.
  
    0.631
AEN95998.1
Hypothetical protein.
       0.582
AEN95999.1
Hypothetical protein.
       0.582
AEN96000.1
Hypothetical protein.
       0.582
AEN96001.1
Hypothetical protein.
       0.582
AEN96002.1
Hypothetical protein; COG3593 Predicted ATP-dependent endonuclease of the OLD family.
  
    0.573
AEN97280.1
Type I restriction-modification system, specificity protein; COG0732 Restriction endonuclease S subunits.
  
  
 0.538
AEN95347.1
COG0286 Type I restriction-modification system methyltransferase subunit.
  
  
 0.533
AEN97130.1
N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit.
  
  
 0.533
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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