STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN96008.1Hypothetical protein. (698 aa)    
Predicted Functional Partners:
AEN96007.1
Hypothetical protein.
 
     0.955
AEN96005.1
Hypothetical protein.
 
     0.589
AEN96006.1
Hypothetical protein; COG2378 Predicted transcriptional regulator.
       0.523
AEN98409.1
Hypothetical protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
     0.450
AEN95334.1
COG1396 Predicted transcriptional regulators.
  
     0.424
AEN98405.1
Hypothetical protein.
  
     0.419
AEN98412.1
Hypothetical protein; COG3843 Type IV secretory pathway, VirD2 components (relaxase).
  
     0.417
AEN98421.1
Hypothetical protein.
  
     0.409
AEN95469.1
Hypothetical protein.
  
     0.404
AEN97119.1
COG3428 Predicted membrane protein.
  
     0.404
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.