STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN96027.1COG0765 ABC-type amino acid transport system, permease component. (225 aa)    
Predicted Functional Partners:
AEN96029.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.995
AEN96028.1
Fe(3+)-transporting ATPase; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.994
AEN96206.1
Glutamine ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.975
AEN97677.1
Amino-acid ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.974
AEN96026.1
COG0765 ABC-type amino acid transport system, permease component.
 
  
 
0.924
argH
COG0165 Argininosuccinate lyase.
  
  
 0.759
AEN96205.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
0.714
AEN98051.1
Ectoine/hydroxyectoine ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
  
 
 0.645
argG
COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.642
argJ
Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
  
  
 0.593
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.