Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN96036.1Inner-membrane translocator; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (335 aa)    
Predicted Functional Partners:
AEN96035.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; COG1129 ABC-type sugar transport system, ATPase component.
 0.996
AEN96034.1
COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.987
AEN95899.1
COG1129 ABC-type sugar transport system, ATPase component.
 
 0.938
AEN95834.1
COG1129 ABC-type sugar transport system, ATPase component.
 
 0.932
AEN97338.1
COG1879 ABC-type sugar transport system, periplasmic component.
 
 
 0.886
AEN95898.1
LacI family transcriptional regulator; COG1879 ABC-type sugar transport system, periplasmic component.
 
 
 0.876
AEN95838.1
LacI family transcriptional regulator; COG1879 ABC-type sugar transport system, periplasmic component.
 
 
 0.871
AEN95833.1
LacI family transcriptional regulator; COG1879 ABC-type sugar transport system, periplasmic component.
 
 
 0.862
AEN95905.1
D-galactose-binding periplasmic protein precursor; COG1879 ABC-type sugar transport system, periplasmic component.
 
 
 0.800
AEN96033.1
Xylose isomerase domain protein TIM barrel; COG1082 Sugar phosphate isomerases/epimerases.
 
    0.637
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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