Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96058.1Hypothetical protein. (149 aa)    
Predicted Functional Partners:
AEN96057.1
GTP-binding protein EngA; COG1160 Predicted GTPases.
       0.539
thiH
COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes.
       0.522
AEN96055.1
COG0502 Biotin synthase and related enzymes.
       0.471
AEN96059.1
COG1102 Cytidylate kinase.
       0.467
AEN96060.1
Amino acid carrier protein; COG1115 Na+/alanine symporter.
       0.450
AEN96054.1
Hypothetical protein.
       0.431
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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