STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN96100.1COG5632 N-acetylmuramoyl-L-alanine amidase. (215 aa)    
Predicted Functional Partners:
AEN96101.1
RNA methylase; COG0116 Predicted N6-adenine-specific DNA methylase.
 
     0.806
AEN96102.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
       0.614
AEN96099.1
Hypothetical protein.
       0.588
AEN96010.1
Hypothetical protein.
  
     0.495
AEN95698.1
Hypothetical protein.
  
     0.472
AEN95888.1
Peptidase S8/S53 subtilisin kexin sedolisin; COG1404 Subtilisin-like serine proteases.
  
     0.427
AEN96098.1
Hypothetical protein.
       0.422
AEN97968.1
Hypothetical protein; COG1388 FOG: LysM repeat.
 
   
 0.418
AEN96266.1
Peptidase S8/S53 subtilisin kexin sedolisin; COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
  
     0.406
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.