STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96124.1COG2703 Hemerythrin. (274 aa)    
Predicted Functional Partners:
AEN95388.1
COG0840 Methyl-accepting chemotaxis protein.
  
    0.621
AEN96256.1
Hypothetical protein; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
  
     0.600
AEN95376.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
 
    0.561
AEN96125.1
Hypothetical protein.
       0.558
AEN96527.1
Hypothetical protein; COG5581 Predicted glycosyltransferase.
  
     0.497
AEN95823.1
COG0716 Flavodoxins.
  
  
 0.492
AEN97630.1
Flavodoxin/nitric oxide synthase; COG0426 Uncharacterized flavoproteins.
  
  
 0.492
AEN96744.1
Hypothetical protein.
  
     0.486
AEN97694.1
Hypothetical protein.
  
     0.474
AEN95532.1
Mobilization protein.
  
     0.450
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.