Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN96143.1Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid. (455 aa)    
Predicted Functional Partners:
AEN96666.1
Sporulation protein YqfD.
 
   
 0.753
AEN96590.1
Nucleoside recognition domain-containing protein; COG3314 Uncharacterized protein conserved in bacteria.
  
  
 0.716
AEN96249.1
Stage II sporulation protein P.
  
   
 0.714
AEN96928.1
Sporulation stage III, protein AE.
  
  
 0.691
AEN95591.1
Hypothetical protein.
 
  
 0.659
AEN97934.1
AbrB family transcriptional regulator; COG2002 Regulators of stationary/sporulation gene expression.
 
   
 0.622
AEN96926.1
Hypothetical protein.
  
    0.621
AEN96929.1
Stage III sporulation protein AD.
  
  
 0.617
AEN95596.1
COG2208 Serine phosphatase RsbU, regulator of sigma subunit.
  
  
 0.613
AEN96925.1
Hypothetical protein.
  
  
 0.596
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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