Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96165.1Hypothetical protein. (511 aa)    
Predicted Functional Partners:
AEN96164.1
COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis.
 
     0.935
AEN96166.1
Hypothetical protein.
       0.821
AEN96163.1
Hypothetical protein.
       0.757
AEN96172.1
Hypothetical protein.
  
     0.747
AEN96167.1
Hypothetical protein.
       0.741
AEN96764.1
Hypothetical protein; COG0459 Chaperonin GroEL (HSP60 family).
  
     0.703
AEN98409.1
Hypothetical protein; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
     0.674
AEN98399.1
Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
  
     0.654
AEN96375.1
Hypothetical protein.
  
     0.645
AEN96162.1
Hypothetical protein.
       0.626
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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