Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96204.1Hypothetical protein. (249 aa)    
Predicted Functional Partners:
AEN96203.1
COG0019 Diaminopimelate decarboxylase.
   
   0.656
AEN96205.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
   
 0.620
AEN96201.1
AzlC family protein; COG1296 Predicted branched-chain amino acid permease (azaleucine resistance).
       0.593
AEN96202.1
COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance).
       0.593
AEN96206.1
Glutamine ABC transporter ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
   
 0.587
AEN97972.1
Hypothetical protein.
  
     0.578
AEN96183.1
Peptidase M23; COG0739 Membrane proteins related to metalloendopeptidases.
 
     0.519
AEN96200.1
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
  
    0.441
AEN97103.1
Peptidase, M24 family protein; COG0006 Xaa-Pro aminopeptidase.
  
 
 0.418
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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