Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96215.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
AEN96214.1
Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.830
AEN96217.1
Hypothetical protein; COG1559 Predicted periplasmic solute-binding protein.
 
     0.815
AEN96213.1
COG4472 Uncharacterized protein conserved in bacteria; Belongs to the UPF0297 family.
       0.793
rnj
Putative hydrolase of the metallo-beta-lactamase superfamily protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.778
AEN96218.1
COG4122 Predicted O-methyltransferase.
       0.775
AEN96476.1
Hypothetical protein.
  
     0.769
AEN96953.1
Hypothetical protein.
  
     0.765
AEN97591.1
Hypothetical protein.
  
     0.761
AEN98259.1
Hypothetical protein.
  
     0.759
AEN96478.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.758
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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