Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN96218.1COG4122 Predicted O-methyltransferase. (213 aa)    
Predicted Functional Partners:
AEN96219.1
Peptidase U32; COG0826 Collagenase and related proteases.
 
  
 0.923
AEN96217.1
Hypothetical protein; COG1559 Predicted periplasmic solute-binding protein.
  
    0.848
rnj
Putative hydrolase of the metallo-beta-lactamase superfamily protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.
       0.844
AEN96768.1
Peptidase, U32 family protein; COG0826 Collagenase and related proteases.
 
  
 0.784
AEN96215.1
Hypothetical protein.
       0.775
AEN96214.1
Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.768
AEN96213.1
COG4472 Uncharacterized protein conserved in bacteria; Belongs to the UPF0297 family.
       0.735
AEN96220.1
COG2706 3-carboxymuconate cyclase.
       0.539
AEN96212.1
MiaB-like tRNA modifying enzyme; COG0621 2-methylthioadenine synthetase.
  
  
 0.532
AEN95172.1
Hypothetical protein.
  
  
 0.501
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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