STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96256.1Hypothetical protein; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. (456 aa)    
Predicted Functional Partners:
AEN96255.1
COG3279 Response regulator of the LytR/AlgR family.
 
  
 0.949
AEN98390.1
Hypothetical protein.
  
     0.723
AEN97694.1
Hypothetical protein.
  
     0.690
AEN95532.1
Mobilization protein.
  
     0.687
AEN96257.1
Hypothetical protein.
       0.631
AEN96124.1
COG2703 Hemerythrin.
  
     0.600
AEN96689.1
COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
  
 
 0.565
AEN98376.1
Accessory gene regulator B; COG4512 Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide.
 
     0.555
AEN96996.1
Hypothetical protein.
  
     0.550
AEN97924.1
Hypothetical protein.
  
     0.535
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.