Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN96273.1Hypothetical protein; COG1653 ABC-type sugar transport system, periplasmic component. (566 aa)    
Predicted Functional Partners:
AEN96275.1
ABC transporter (permease); COG0395 ABC-type sugar transport system, permease component.
 
  0.992
AEN96274.1
Transmembrane lipoprotein; COG4209 ABC-type polysaccharide transport system, permease component.
 
 
 0.991
AEN96285.1
COG0395 ABC-type sugar transport system, permease component.
  
  0.941
AEN96276.1
Hypothetical protein; COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains.
 
  
 
0.938
AEN96613.1
Sugar ABC transporter substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
  
  
 
0.920
AEN96272.1
Hypothetical protein; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
   
 0.875
AEN96271.1
Hypothetical protein; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
     0.837
AEN96279.1
Xylanase Y; COG3405 Endoglucanase Y.
 
     0.836
AEN96268.1
acyl-CoA thioesterase I-like protein; COG2755 Lysophospholipase L1 and related esterases.
 
     0.815
AEN97394.1
Hypothetical protein; COG2755 Lysophospholipase L1 and related esterases.
  
     0.636
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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