Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEN96279.1Xylanase Y; COG3405 Endoglucanase Y. (380 aa)    
Predicted Functional Partners:
AEN96278.1
Alpha-glucuronidase Gh115A.
 
   
 0.904
AEN96276.1
Hypothetical protein; COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains.
 
     0.876
AEN96273.1
Hypothetical protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.836
AEN96269.1
Arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
   
 0.814
AEN96272.1
Hypothetical protein; COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain.
 
     0.713
AEN96268.1
acyl-CoA thioesterase I-like protein; COG2755 Lysophospholipase L1 and related esterases.
 
   
 0.691
AEN96280.1
COG3459 Cellobiose phosphorylase.
 
   
 0.687
AEN96277.1
COG2382 Enterochelin esterase and related enzymes.
 
     0.685
AEN96281.1
Cellobiose-phosphorylase; COG3459 Cellobiose phosphorylase.
 
   
 0.681
AEN96353.1
COG3867 Arabinogalactan endo-1,4-beta-galactosidase.
  
     0.674
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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