STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96280.1COG3459 Cellobiose phosphorylase. (804 aa)    
Predicted Functional Partners:
AEN97418.1
Glycosyltransferase 36; COG3459 Cellobiose phosphorylase.
  
  
 
0.914
AEN96281.1
Cellobiose-phosphorylase; COG3459 Cellobiose phosphorylase.
 
    
0.815
AEN96283.1
Hypothetical protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.713
AEN96279.1
Xylanase Y; COG3405 Endoglucanase Y.
 
   
 0.687
AEN95788.1
Hypothetical protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.614
AEN96284.1
COG1175 ABC-type sugar transport systems, permease components.
 
     0.576
AEN96278.1
Alpha-glucuronidase Gh115A.
 
     0.528
AEN96276.1
Hypothetical protein; COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains.
 
     0.522
AEN96285.1
COG0395 ABC-type sugar transport system, permease component.
 
     0.442
AEN96286.1
Beta-glucosidase-like glycosyl hydrolase; COG1472 Beta-glucosidase-related glycosidases.
 
   
 0.437
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.