STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96285.1COG0395 ABC-type sugar transport system, permease component. (281 aa)    
Predicted Functional Partners:
AEN96284.1
COG1175 ABC-type sugar transport systems, permease components.
 
  0.993
AEN96283.1
Hypothetical protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
  0.987
AEN95789.1
COG1175 ABC-type sugar transport systems, permease components.
 
  0.972
AEN96611.1
COG1175 ABC-type sugar transport systems, permease components.
 
  0.970
AEN95788.1
Hypothetical protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
  0.968
AEN97049.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.964
AEN96274.1
Transmembrane lipoprotein; COG4209 ABC-type polysaccharide transport system, permease component.
 
 
 0.950
AEN96273.1
Hypothetical protein; COG1653 ABC-type sugar transport system, periplasmic component.
  
  0.941
AEN96276.1
Hypothetical protein; COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains.
  
  0.941
AEN96275.1
ABC transporter (permease); COG0395 ABC-type sugar transport system, permease component.
  
  
 
0.920
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.