STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96309.1Hypothetical protein. (47 aa)    
Predicted Functional Partners:
AEN96308.1
Hypothetical protein.
       0.671
AEN96307.1
Hypothetical protein; COG1846 Transcriptional regulators.
       0.588
AEN96306.1
Small GTP-binding protein; COG0480 Translation elongation factors (GTPases).
       0.570
AEN96305.1
Isopentenyl-diphosphate delta-isomerase; COG3044 Predicted ATPase of the ABC class.
       0.526
AEN96310.1
COG4624 Iron only hydrogenase large subunit, C-terminal domain.
       0.458
AEN96304.1
Hypothetical protein; COG0714 MoxR-like ATPases.
       0.431
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.