STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96340.1Hypothetical protein; COG0760 Parvulin-like peptidyl-prolyl isomerase. (324 aa)    
Predicted Functional Partners:
AEN95799.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
   0.829
AEN96947.1
Cell division protein FtsQ; Essential cell division protein.
  
  
 0.765
AEN97577.1
Hypothetical protein.
 
  
 0.730
AEN96217.1
Hypothetical protein; COG1559 Predicted periplasmic solute-binding protein.
 
     0.716
AEN96887.1
COG3103 SH3 domain protein.
  
    0.711
AEN97748.1
Hypothetical protein.
  
     0.711
AEN98265.1
Hypothetical protein.
  
     0.711
AEN96641.1
Hypothetical protein.
  
   
 0.709
AEN96953.1
Hypothetical protein.
  
     0.709
AEN96341.1
MATE efflux family protein; COG0534 Na+-driven multidrug efflux pump.
   
   0.702
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.