STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96356.1COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid). (285 aa)    
Predicted Functional Partners:
AEN96355.1
Putative R-2-hydroxyglutaryl-CoA dehydratase subunit/R-2-hydroxyglutaryl-CoA dehydratase activase; COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain).
       0.612
AEN98247.1
Membrane protease subunit, stomatin/prohibitin-like protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
   
 0.586
AEN97461.1
Hypothetical protein.
  
     0.579
AEN96575.1
Phosphotransferase system, HPr-like protein.
  
     0.553
AEN96650.1
Peptidoglycan glycosyltransferase; COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
     0.551
AEN96776.1
COG0212 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
  
 0.528
AEN97743.1
Hypothetical protein; COG3935 Putative primosome component and related proteins.
  
     0.522
AEN95638.1
Hypothetical protein; COG2508 Regulator of polyketide synthase expression.
  
     0.514
AEN95847.1
Hypothetical protein.
  
     0.514
AEN98244.1
Hypothetical protein.
  
     0.488
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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