STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96388.1COG4422 Bacteriophage protein gp37. (240 aa)    
Predicted Functional Partners:
AEN96389.1
Hypothetical protein; COG3894 Uncharacterized metal-binding protein.
       0.714
AEN96390.1
MATE efflux family protein; COG0534 Na+-driven multidrug efflux pump.
       0.668
AEN96387.1
Exodeoxyribonuclease; COG0708 Exonuclease III.
       0.539
AEN96392.1
Hypothetical protein; COG2198 FOG: HPt domain.
 
     0.536
AEN96391.1
Diguanylate cyclase/phosphodiesterase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
     0.496
AEN95176.1
ABC transporter permease; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
     0.432
AEN96393.1
COG2091 Phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
       0.410
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.