STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96415.1Hypothetical protein. (443 aa)    
Predicted Functional Partners:
AEN96414.1
Hypothetical protein.
 
     0.868
AEN96417.1
Hypothetical protein; COG5545 Predicted P-loop ATPase and inactivated derivatives.
 
     0.689
AEN96416.1
COG0358 DNA primase (bacterial type).
  
    0.630
AEN96412.1
DNA binding domain-containing protein.
 
     0.616
AEN98211.1
Hypothetical protein.
 
     0.586
AEN97204.1
Hypothetical protein.
 
     0.549
AEN96419.1
COG1961 Site-specific recombinases, DNA invertase Pin homologs.
 
     0.527
AEN98367.1
Hypothetical protein.
 
     0.497
AEN98370.1
Hypothetical protein.
  
     0.481
AEN98372.1
Site-specific recombinase, putative; COG1961 Site-specific recombinases, DNA invertase Pin homologs.
  
     0.472
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.