STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN96417.1Hypothetical protein; COG5545 Predicted P-loop ATPase and inactivated derivatives. (422 aa)    
Predicted Functional Partners:
AEN96416.1
COG0358 DNA primase (bacterial type).
 
     0.830
AEN95491.1
Hypothetical protein.
 
     0.706
AEN98189.1
Hypothetical protein.
 
     0.703
AEN96415.1
Hypothetical protein.
 
     0.689
AEN95488.1
Putative conjugal transfer protein.
 
     0.540
AEN95472.1
Hypothetical protein.
  
     0.499
AEN98194.1
Hypothetical protein.
  
     0.489
AEN98192.1
Putative conjugal transfer protein.
 
     0.467
AEN95489.1
COG0358 DNA primase (bacterial type).
 
     0.454
AEN96418.1
Hypothetical protein.
       0.415
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.