Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN96440.1Sugars ABC transporter substrate-binding protein; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. (477 aa)    
Predicted Functional Partners:
AEN96442.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
   0.932
AEN96441.1
COG1175 ABC-type sugar transport systems, permease components.
 
   0.928
AEN96443.1
Catabolite control protein A; COG1609 Transcriptional regulators.
 
    0.645
AEN96963.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 
 0.593
AEN97049.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
 
 0.593
AEN96285.1
COG0395 ABC-type sugar transport system, permease component.
 
   0.504
AEN96284.1
COG1175 ABC-type sugar transport systems, permease components.
 
   0.483
AEN95789.1
COG1175 ABC-type sugar transport systems, permease components.
 
   0.478
AEN97413.1
Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component.
  
   0.448
AEN95760.1
Binding-protein-dependent transporters inner membrane component; COG0395 ABC-type sugar transport system, permease component.
  
   0.436
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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