Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN96442.1Binding-protein-dependent transport systems inner membrane component; COG0395 ABC-type sugar transport system, permease component. (290 aa)    
Predicted Functional Partners:
AEN96441.1
COG1175 ABC-type sugar transport systems, permease components.
 
   0.969
AEN96440.1
Sugars ABC transporter substrate-binding protein; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
   0.932
AEN97049.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.799
AEN96963.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.768
AEN96443.1
Catabolite control protein A; COG1609 Transcriptional regulators.
 
     0.766
AEN95950.1
ABC transporter inner membrane protein; COG1175 ABC-type sugar transport systems, permease components.
 
   0.759
AEN97414.1
COG1175 ABC-type sugar transport systems, permease components.
 
   0.752
AEN96611.1
COG1175 ABC-type sugar transport systems, permease components.
 
   0.745
AEN97400.1
COG1175 ABC-type sugar transport systems, permease components.
 
   0.745
AEN97158.1
Binding-protein-dependent transporters inner membrane component; COG1175 ABC-type sugar transport systems, permease components.
 
   0.744
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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