STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96527.1Hypothetical protein; COG5581 Predicted glycosyltransferase. (250 aa)    
Predicted Functional Partners:
AEN95250.1
Hypothetical protein.
 
  
 0.938
AEN98269.1
Hypothetical protein.
 
  
 0.926
AEN95249.1
COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor).
 
  
 0.916
AEN96525.1
GTP-binding signal recognition particle SRP54, G-domain protein; COG1419 Flagellar GTP-binding protein.
 
  
 0.904
AEN95313.1
COG1345 Flagellar capping protein.
 
  
 0.896
AEN96519.1
Hypothetical protein.
 
    0.893
AEN95257.1
COG1345 Flagellar capping protein.
 
  
 0.886
AEN96526.1
Flagellar biosynthesis protein FlhG; COG0455 ATPases involved in chromosome partitioning.
 
    0.874
cheB
Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
 0.873
AEN96517.1
Flagellar motor switch protein; COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation.
 
  
 0.866
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.