Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEN96545.1COG2035 Predicted membrane protein. (283 aa)    
Predicted Functional Partners:
AEN96544.1
Na/Pi-cotransporter; COG1283 Na+/phosphate symporter.
 
     0.807
AEN96543.1
Hypothetical protein.
       0.671
AEN96542.1
COG1846 Transcriptional regulators.
       0.532
AEN96546.1
Polysaccharide deacetylase Est4C; COG0726 Predicted xylanase/chitin deacetylase.
       0.499
AEN96547.1
COG1664 Integral membrane protein CcmA involved in cell shape determination.
  
    0.467
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
       0.451
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.408
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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