AEN96564.1 protein (Roseburia hominis) - STRING interaction network

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AEN96564.1

COG0227 Ribosomal protein L28. (35 aa)

Predicted Functional Partners:

rpmG

0.993

rpsT

0.993

rpsO

0.993

rpmF

0.993

rpsZ

0.993

rplM

0.992

rplU

0.992

rpmI

0.992

rpsR

0.992

rpsF

0.992

Your Current Organism:

Roseburia hominis

NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEN96564.1	rplM	RHOM_07255	RHOM_01470	COG0227 Ribosomal protein L28.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.992
AEN96564.1	rplU	RHOM_07255	RHOM_07535	COG0227 Ribosomal protein L28.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
AEN96564.1	rpmF	RHOM_07255	RHOM_09870	COG0227 Ribosomal protein L28.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.993
AEN96564.1	rpmG	RHOM_07255	RHOM_00935	COG0227 Ribosomal protein L28.	COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.993
AEN96564.1	rpmI	RHOM_07255	RHOM_08100	COG0227 Ribosomal protein L28.	COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.992
AEN96564.1	rpsF	RHOM_07255	RHOM_16645	COG0227 Ribosomal protein L28.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.992
AEN96564.1	rpsO	RHOM_07255	RHOM_08465	COG0227 Ribosomal protein L28.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.993
AEN96564.1	rpsR	RHOM_07255	RHOM_16635	COG0227 Ribosomal protein L28.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.992
AEN96564.1	rpsT	RHOM_07255	RHOM_05640	COG0227 Ribosomal protein L28.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.993
AEN96564.1	rpsZ	RHOM_07255	RHOM_14550	COG0227 Ribosomal protein L28.	Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.993
rplM	AEN96564.1	RHOM_01470	RHOM_07255	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0227 Ribosomal protein L28.	0.992
rplM	rplU	RHOM_01470	RHOM_07535	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.993
rplM	rpmF	RHOM_01470	RHOM_09870	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.991
rplM	rpmG	RHOM_01470	RHOM_00935	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.992
rplM	rpmI	RHOM_01470	RHOM_08100	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.992
rplM	rpsF	RHOM_01470	RHOM_16645	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.993
rplM	rpsO	RHOM_01470	RHOM_08465	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.995
rplM	rpsR	RHOM_01470	RHOM_16635	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.993
rplM	rpsT	RHOM_01470	RHOM_05640	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.992
rplM	rpsZ	RHOM_01470	RHOM_14550	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.993

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