Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96565.1COG1302 Uncharacterized protein conserved in bacteria. (119 aa)    
Predicted Functional Partners:
AEN96566.1
DegV protein; COG1461 Predicted kinase related to dihydroxyacetone kinase.
 
  
 0.994
AEN98088.1
degV family protein; COG1307 Uncharacterized protein conserved in bacteria.
 
    0.692
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.659
AEN96161.1
DegV family protein; COG1307 Uncharacterized protein conserved in bacteria.
 
    0.639
AEN97383.1
DAK2 domain/DegV family protein; COG1307 Uncharacterized protein conserved in bacteria.
 
    0.636
AEN95916.1
degV family protein; COG1307 Uncharacterized protein conserved in bacteria.
 
    0.592
AEN96972.1
DAK2 domain/DegV family protein; COG1307 Uncharacterized protein conserved in bacteria.
 
    0.586
AEN96564.1
COG0227 Ribosomal protein L28.
       0.560
AEN96213.1
COG4472 Uncharacterized protein conserved in bacteria; Belongs to the UPF0297 family.
  
  
 0.512
AEN96589.1
Hypothetical protein.
 
     0.437
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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