STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96571.1Putative permease; COG0577 ABC-type antimicrobial peptide transport system, permease component. (933 aa)    
Predicted Functional Partners:
AEN96570.1
Hypothetical protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
   0.960
AEN97956.1
ABC transporter ATP binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
   0.678
AEN97717.1
Arabinogalactan endo-1,4-beta-galactosidase; COG1609 Transcriptional regulators.
  
     0.533
AEN97345.1
Hypothetical protein.
 
    0.529
AEN95449.1
Hypothetical protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
   0.520
AEN96572.1
Glucosyl hydrolase family protein; COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
       0.518
AEN96569.1
Hypothetical protein.
       0.514
AEN95519.1
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
   0.480
AEN96409.1
Macrolide export ATP-binding/permease MacB; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
   0.480
AEN97164.1
Hypothetical protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
   0.480
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.