Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
AEN96590.1Nucleoside recognition domain-containing protein; COG3314 Uncharacterized protein conserved in bacteria. (309 aa)    
Predicted Functional Partners:
AEN96666.1
Sporulation protein YqfD.
 
   
 0.878
AEN98436.1
COG0700 Uncharacterized membrane protein.
 
  
 0.849
AEN95591.1
Hypothetical protein.
  
   
 0.829
AEN96446.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.827
AEN96932.1
Stage III sporulation protein AA; COG3854 Uncharacterized protein conserved in bacteria.
  
   
 0.794
AEN96929.1
Stage III sporulation protein AD.
  
   
 0.782
AEN96928.1
Sporulation stage III, protein AE.
  
    0.778
AEN97718.1
Sporulation transcriptional regulator SpoIIID.
  
  
 0.778
AEN95596.1
COG2208 Serine phosphatase RsbU, regulator of sigma subunit.
  
     0.773
gpr
Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
     0.773
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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