Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN96692.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
AEN97749.1
Hypothetical protein.
  
     0.768
AEN96693.1
Hypothetical protein.
       0.756
AEN97457.1
Hypothetical protein.
  
     0.723
AEN97575.1
Hypothetical protein; COG0489 ATPases involved in chromosome partitioning.
  
     0.703
AEN97988.1
Hypothetical protein.
  
     0.692
AEN96667.1
Hypothetical protein.
  
     0.672
AEN96867.1
Hypothetical protein.
  
     0.666
AEN98265.1
Hypothetical protein.
  
     0.653
AEN98327.1
Hypothetical protein; COG0789 Predicted transcriptional regulators.
  
     0.652
AEN96855.1
Type 1 dockerin.
  
     0.651
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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