Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN96706.1SpoIID/LytB domain-containing protein; COG2385 Sporulation protein and related proteins. (749 aa)    
Predicted Functional Partners:
AEN96705.1
COG1295 Predicted membrane protein; Belongs to the UPF0761 family.
       0.677
AEN96446.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.538
AEN95464.1
COG1484 DNA replication protein.
   
    0.527
AEN97187.1
COG1484 DNA replication protein.
   
    0.527
AEN97198.1
COG1484 DNA replication protein.
   
    0.527
AEN97780.1
COG1484 DNA replication protein.
   
    0.527
AEN98205.1
COG1484 DNA replication protein.
   
    0.527
AEN96925.1
Hypothetical protein.
  
  
 0.500
queA
S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.497
AEN95591.1
Hypothetical protein.
 
   
 0.492
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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