STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN96714.1Hypothetical protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB. (297 aa)    
Predicted Functional Partners:
AEN97363.1
Modulation of CheA activity in response to attractants (chemotaxis protein); COG0835 Chemotaxis signal transduction protein.
 
 
 
 0.824
AEN96713.1
Response regulator receiver domain protein (CheY-like); COG0784 FOG: CheY-like receiver.
  
  
 0.821
AEN95828.1
COG0642 Signal transduction histidine kinase.
 
 
 
 0.713
AEN96391.1
Diguanylate cyclase/phosphodiesterase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
   
 
 0.710
AEN97062.1
Hypothetical protein.
 
     0.708
AEN95379.1
PAS/PAC sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver.
   
 
 0.705
AEN97362.1
Hypothetical protein.
 
    0.704
AEN95257.1
COG1345 Flagellar capping protein.
  
    0.702
AEN96515.1
Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.690
AEN96120.1
COG0642 Signal transduction histidine kinase.
   
 
 0.685
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.