STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN96747.1Xylose isomerase domain-containing protein; COG1082 Sugar phosphate isomerases/epimerases. (295 aa)    
Predicted Functional Partners:
AEN96748.1
Glycoside hydrolase family 28; COG5434 Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family.
 
     0.941
AEN96751.1
Glucosyl hydrolase family protein.
 
    0.871
AEN96746.1
Hypothetical protein.
 
     0.827
AEN96572.1
Glucosyl hydrolase family protein; COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins.
 
    0.762
AEN96752.1
Extracellular solute-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
    0.754
AEN95150.1
Oxidoreductase domain-containing protein; COG0673 Predicted dehydrogenases and related proteins.
  
  
 0.645
AEN96032.1
Oxidoreductase domain protein; COG0673 Predicted dehydrogenases and related proteins.
  
  
 0.645
AEN96749.1
Binding-protein-dependent transporters inner membrane component; COG0395 ABC-type sugar transport system, permease component.
 
    0.640
AEN96750.1
Binding-protein-dependent transporters inner membrane component; COG1175 ABC-type sugar transport systems, permease components.
 
    0.602
AEN95221.1
Glycoside hydrolase family protein; COG5434 Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family.
 
     0.580
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.